Dr. SEYIT UGUZ, Research Assistant

 

Dr. Seyit Uguz is an accomplished Biosystems Engineering researcher with over a decade of experience in environmental biotechnology and agricultural air quality management. Currently serving as a Research Assistant at Yozgat Bozok University, Turkey, he has established himself as an international expert in photobioreactor systems for pollution mitigation from animal production facilities. His groundbreaking work focuses on utilizing microalgae cultivation to simultaneously treat air pollutants and produce valuable animal feed, addressing critical challenges in sustainable livestock production. With doctoral training from Bursa Uludag University and postdoctoral research experience at South Dakota State University, Dr. Uguz has developed innovative solutions that bridge environmental engineering, microbiology, and agricultural systems. His research portfolio encompasses bioaerosol characterization, pollutant gas mitigation, microalgae biotechnology, and sensor development for air quality monitoring. Dr. Uguz has authored 27 peer-reviewed journal articles, three book chapters, and holds patents for photobioreactor technology. His interdisciplinary approach integrates civil engineering fundamentals with biosystems applications, making significant contributions to climate-smart agriculture and circular economy principles in livestock production. He has secured over $160,000 in competitive research funding and maintains active collaborations with institutions across Turkey and the United States.

Education

Doctor of Philosophy (Ph.D.) in Biosystems Engineering – Bursa Uludag University, Turkey (Completed May 2023). The doctoral research focused on developing and optimizing photobioreactor systems for mitigating ammonia and carbon dioxide emissions from animal production facilities while simultaneously cultivating microalgae for animal feed applications. The dissertation integrated engineering design, microbial cultivation, environmental monitoring, and nutritional assessment methodologies.

Master of Science (M.S.) in Biosystems Engineering – Bursa Uludag University, Turkey (Completed August 2017). The master’s research investigated agricultural structures, environmental control systems, and biosystems applications in livestock production, establishing foundational expertise in animal housing design and environmental management.

Master of Science (M.S.) in Civil Engineering – Selcuk University, Turkey (Completed September 2016). This advanced degree provided specialized knowledge in structural engineering, materials science, and construction systems that complement biosystems engineering applications in agricultural infrastructure.

Bachelor of Science in Engineering (B.S.E.) in Civil Engineering – Selcuk University, Turkey (Completed June 2011). The undergraduate education established comprehensive understanding of engineering principles, structural analysis, materials science, and design methodologies that form the foundation for interdisciplinary biosystems research.

Mobility Training Program – Agriculture and Biotechnology, University of Technology and Life Sciences, Poland (2015, one-week intensive program). This international training experience provided exposure to European agricultural biotechnology practices and research methodologies.

Research Focus

Dr. Uguz’s research program centers on developing sustainable biotechnological solutions for environmental challenges in animal agriculture through three interconnected research streams. The primary focus area involves photobioreactor system design and optimization for biological treatment of air pollutants from livestock facilities, particularly ammonia (NH₃) and carbon dioxide (CO₂) emissions from poultry and swine operations. This work encompasses reactor engineering, microalgae cultivation, gas mass transfer, and process optimization to achieve simultaneous pollution mitigation and biomass production. The second major research stream addresses bioaerosol characterization and particulate matter (PM) source attribution in and around animal feeding operations, employing size-segregated sampling, next-generation sequencing for microbial composition analysis, and low-cost sensor validation for real-time monitoring. The third research focus examines microalgae and cyanobacteria cultivation using livestock waste streams (exhaust air, liquid manure, wastewater) as nutrient sources, with comprehensive assessment of resulting biomass for animal feed applications including nutritional composition, amino acid profiles, mineral content, and safety evaluation. Cross-cutting themes include agricultural air quality management, circular economy principles in livestock production, climate change mitigation through biological carbon capture, resource recovery from waste streams, machine learning applications for algal monitoring, and multi-criteria decision analysis for process optimization. The research integrates engineering design, microbiology, environmental science, animal nutrition, and data science methodologies to develop practical, economically viable solutions for sustainable intensification of animal agriculture. Dr. Uguz’s work directly addresses United Nations Sustainable Development Goals related to climate action, responsible consumption and production, and innovation in agriculture.

Experience

Research Assistant, Yozgat Bozok University (2024 – Present)

Currently serving in the Department of Biosystems Engineering at Yozgat Bozok University, Yozgat, Turkey. Conducting independent research on environmental biotechnology applications in agriculture while contributing to departmental teaching and research infrastructure development. Managing ongoing research projects, supervising undergraduate research, and establishing new collaborations for sustainable agriculture research initiatives.

Postdoctoral Research Fellow, South Dakota State University (2024 – 2025)

Working under the supervision of Dr. Xufei Yang in the Department of Agricultural and Biosystems Engineering at South Dakota State University, Brookings, South Dakota, USA. Research focuses on size-segregated bioaerosol characterization and particulate matter source attribution in and near swine production facilities. Responsibilities include field sampling campaigns, laboratory analysis of bioaerosol samples, next-generation sequencing data analysis for microbial community characterization, validation and calibration of low-cost PM sensors, development of PM source apportionment models, and preparation of manuscripts for peer-reviewed publication. The research employs advanced analytical techniques including aerosol spectrometry, microscopy, molecular biology methods, and statistical modeling to understand bioaerosol emissions, transport, and fate in agricultural environments. This work contributes to protecting air quality for farm workers, nearby residents, and livestock while informing regulatory decisions and best management practices. Supported by TUBITAK 2219 International Postdoctoral Research Fellowship providing $34,000 annual funding.

Ph.D. Research Fellow, South Dakota State University (2019 – 2020)

Served as visiting research fellow in the laboratory of Dr. Gary Anderson at the Department of Agricultural and Biosystems Engineering, South Dakota State University, Brookings, South Dakota, USA. The research focused on photobioreactor system design and optimization for mitigation of pollutant gases released from animal barns. Responsibilities included designing and constructing laboratory-scale photobioreactor systems, conducting experiments with Scenedesmus dimorphus and other microalgae species, optimizing cultivation conditions using pollutant gases (ammonia and carbon dioxide) as substrates, developing mathematical models for gas removal efficiency, analyzing algal growth kinetics and biomass productivity, and collaborating with interdisciplinary research teams. The research demonstrated proof-of-concept for biological air treatment systems that convert waste gases into valuable algal biomass suitable for animal feed, establishing fundamental engineering parameters for scale-up and commercialization. This international research experience was supported by TUBITAK 2214-A International Research Fellowship and YOK YUDAB Fellowship, providing comprehensive funding for research activities and living expenses during the one-year appointment.

Research and Teaching Assistant, Bursa Uludag University (2014 – 2024)

Served for ten years in the laboratory of Dr. Ercan Simsek at the Department of Biosystems Engineering, Bursa Uludag University, Bursa, Turkey. This position encompassed both research and teaching responsibilities across undergraduate biosystems engineering curriculum. Research activities included developing and executing research projects on agricultural structures, environmental control systems in livestock facilities, water resource management in agriculture, rural development, and environmental pollution from animal production. Teaching responsibilities included serving as teaching assistant for Agricultural Structures, Land Surveying, Statics, Strength of Materials, and Farm Building Materials courses for undergraduate students. Specific teaching duties involved assisting professors with laboratory and application sessions, supervising student fieldwork and practical exercises, grading assignments, examinations, and project reports, providing academic advising and mentorship to undergraduate students, and developing educational materials and laboratory protocols. Research supervision included mentoring five undergraduate students during their senior capstone projects funded by TUBITAK 2209 Research Project Support Program. During this tenure, completed Ph.D. degree requirements including comprehensive examinations, dissertation research, and successful defense. Contributed to establishing research infrastructure, securing competitive research grants totaling over $160,000, and building international research collaborations. This position provided comprehensive training in academic research, teaching, grant writing, laboratory management, and scholarly communication.

Research Assistant, Yozgat Bozok University (2012 – 2014)

Began academic career at the Department of Biosystems Engineering, Yozgat Bozok University, Yozgat, Turkey. Gained initial research experience in biosystems engineering applications, agricultural structures, and environmental systems. Responsibilities included supporting faculty research projects, assisting with laboratory maintenance and equipment operation, contributing to data collection and analysis, and participating in departmental academic activities. This early-career position established foundation for graduate education and subsequent research specialization in environmental biotechnology and agricultural air quality management.

Research Timeline

2011-2012: Foundation phase completing civil engineering bachelor’s degree at Selcuk University, establishing fundamental engineering knowledge in structural analysis, materials science, and design principles that would later support interdisciplinary biosystems research.

2012-2014: Early academic career phase as Research Assistant at Yozgat Bozok University, gaining initial exposure to biosystems engineering research, agricultural systems, and academic research methodologies while beginning graduate education in biosystems engineering.

2014-2017: Master’s research phase at Bursa Uludag University focusing on agricultural structures, livestock housing systems, and environmental management in animal production. Conducted research on soil pollution from animal feed and manure, water usage in livestock enterprises, and structural design of animal housing facilities. Completed dual master’s degrees in Biosystems Engineering (2017) and Civil Engineering (2016).

2017-2019: Doctoral research development phase establishing expertise in photobioreactor systems and microalgae cultivation. Initiated research on biological treatment of air pollutants from animal facilities, developed initial laboratory protocols for microalgae cultivation using livestock waste streams, and established collaborations with international research groups.

2019-2020: International doctoral research phase at South Dakota State University working with Dr. Gary Anderson on photobioreactor system optimization. Conducted intensive laboratory experiments demonstrating ammonia and carbon dioxide removal using Scenedesmus dimorphus, developed engineering design parameters for scale-up, and published foundational research in high-impact journals. This year represented breakthrough period establishing proof-of-concept for photobioreactor technology in agricultural applications.

2020-2023: Doctoral completion and research expansion phase at Bursa Uludag University. Scaled up photobioreactor research to pilot-scale systems installed in commercial poultry houses, conducted extensive field trials characterizing system performance under real-world conditions, completed nutritional assessment of algal biomass for animal feed applications, and filed patent applications for photobioreactor technology. Successfully defended doctoral dissertation in May 2023. Published multiple high-impact papers in journals including Journal of Environmental Management and Environmental Science and Pollution Research.

2023-2024: Post-doctoral transition phase continuing research at Bursa Uludag University while supervising undergraduate research projects and securing postdoctoral fellowship funding. Expanded research scope to include machine learning applications for algal monitoring, direct current flocculation methods for algal harvesting, and comprehensive assessment of microalgae cultivation under various environmental conditions.

2024-Present: Postdoctoral research phase at South Dakota State University with Dr. Xufei Yang focusing on bioaerosol characterization in swine production facilities. Conducting field sampling campaigns, employing next-generation sequencing for microbial community analysis, validating low-cost PM sensors, and developing source apportionment models. Simultaneously maintaining Research Assistant position at Yozgat Bozok University in Turkey. This phase represents expansion into air quality monitoring, microbial ecology, and sensor technology development while maintaining core expertise in biological air treatment systems.

Research Publications

Peer-Reviewed Journal Articles

  1. Uguz S., Kumar P., Tiwari S., Chang Y., Yang X. (2025). Field Testing of Low-Cost PM Sensors in Animal Production Facilities. Journal of Tekirdag Agricultural Faculty, 22(3), 732-747. https://doi.org/10.33462/jotaf.1555650
  2. Kommareddy A., Uguz S., Anderson G. (2025). Matching Light Source Spectrum to Photosynthetic Spectrum of Algae. Turkish Journal of Agriculture – Food Science and Technology, 13(5), 1270-1277. https://doi.org/10.24925/turjaf.v13i5.1270-1277.7545
  3. Uguz S. (2025). Impact of Elevated Ammonia Concentration on Scenedesmus dimorphus Growth in a Flat-Plate Photobioreactor. Turkish Journal of Agricultural and Natural Sciences, 12(2), 482-491. https://doi.org/10.30910/turkjans.1559035
  4. Celik A., Uguz S. (2025). Seasonal Impacts on Thermal Comfort and Growth Performance of Broilers in Commercial Conditions. Poultry Studies, 22(1), 18-23. https://doi.org/10.34233/jpr.1684062
  5. Celik A., Uguz S. (2025). Comparative Assessment of Minerals, Heavy Metal Content and Microbiological Quality of Microalgae Cultivated with Broiler House Exhaust Air. Environmental Science and Pollution Research, 32(1), 18908-18918. https://doi.org/10.1007/s11356-025-36832-3
  6. Uguz S., Sahin Y.S., Kumar P., Yang X., Anderson G. (2025). Real-Time Algal Monitoring Using Novel Machine Learning Approaches. Big Data and Cognitive Computing, 9(6), 153. https://doi.org/10.3390/bdcc9060153
  7. Uguz S., Sozcu A., Simsek E., Yaslioglu E. (2025). Nutritional and Amino Acid Composition of Scenedesmus sp. Cultivated under Various Light Intensities. Current Microbiology, 82(6), 274. https://doi.org/10.1007/s00284-025-04248-4
  8. Haleem N., Yuan J., Uguz S., Ucok S., Gu Z., Yang X. (2025). Direct Current (DC) Initiated Flocculation of Scenedesmus dimorphus. Environmental Science and Pollution Research, 1-7. https://doi.org/10.1007/s11356-025-36298-3
  9. Anand S., Kumar P., Singh S., Tiwari S., Mishra R., Uguz S., McClements D.J. (2025). Diet-Gut Microbiome Nexus: A New Paradigm in Food-Based Mental Disease Therapeutics. Food Reviews International, 1-27. https://doi.org/10.1080/87559129.2025.2479123
  10. Uguz S., Anderson G., Simsek E., Ates K., Yilmaz M., Yaslioglu E., Delice H., Ulusoy Y. (2025). Growth Performance of Scenedesmus sp. AQUAMEB-57, Ankistrodesmus sp. AQUAMEB-33, and Synechococcaceae AQUAMEB-32 Cultivated at Different Light Intensities. Environmental Technology. In Press. https://doi.org/10.1080/09593330.2025.2474254
  11. Uguz S. (2024). Photobioreactor Systems for Mitigating Ammonia and Carbon Dioxide from a Broiler House. Journal of Environmental Management, 371, 123216. https://doi.org/10.1016/j.jenvman.2024.123216
  12. Kumar P., Tiwari S., Uguz S., Li Z., Gonzalez J., Wei L., Yang X. (2024). Bioaerosols Downwind from Animal Feeding Operations: A Comprehensive Review. Journal of Hazardous Materials, 135825. https://doi.org/10.1016/j.jhazmat.2024.135825
  13. Uguz S., Sozcu A. (2024). Pollutant Gases to Algal Animal Feed: Impacts of Poultry House Exhaust Air on Amino Acid Profile of Algae. Animals, 14(5), 754. https://doi.org/10.3390/ani14050754
  14. Uguz S., Anderson G., Yang X., Simsek E., Osabutey A., Yilmaz M., Min K. (2024). Microalgae Cultivation Using Ammonia and Carbon Dioxide Concentrations Typical of Pig Barns. Environmental Technology, 1-13. https://doi.org/10.1080/09593330.2024.2311082
  15. Koç N., Barbaros S., Çelik E., Uğuz S., Şimşek E., Yaslıoglu E. (2024). Removal of Nitrogen and Phosphorus from Liquid Dairy Manure Using Microalgae. Yuzuncu Yıl University Journal of Agricultural Sciences, 34(4), 571-583. https://doi.org/10.29133/yyutbd.1492195
  16. Haleem N., Kumar P., Uguz S., Jamal Y., McMaine J., Yang X. (2023). Viability of Artificial Rain for Air Pollution Control: Insights from Natural Rains and Roadside Sprinkling. Atmosphere, 14(12), 1714. https://doi.org/10.3390/atmos14121714
  17. Uguz S., Sozcu A. (2023). Nutritional Value of Microalgae and Cyanobacteria Produced with Batch and Continuous Cultivation: Potential Use as Feed Material in Poultry Nutrition. Animals, 13(21), 3431. https://doi.org/10.3390/ani13213431
  18. Uguz S., Arsu T., Yang X., Anderson G. (2023). Multi-Criteria Decision Analysis for Optimizing CO₂ and NH₃ Removal by Scenedesmus dimorphus Photobioreactors. Atmosphere, 14(7), 1079. https://doi.org/10.3390/atmos14071079
  19. Osabutey A., Haleem N., Uguz S., Albert K.L., Anderson G.A., Min K., Yang X. (2023). Makeup Water Addition Can Affect the Growth of Scenedesmus dimorphus in Photobioreactors. AgriEngineering, 5(2), 982-991. https://doi.org/10.3390/agriengineering5020061
  20. Osabutey A., Haleem N., Uguz S., Min K., Samuel R., Albert K., Yang X. (2023). Growth of Scenedesmus dimorphus in Swine Wastewater with Versus without Solid–Liquid Separation Pretreatment. Bioresource Technology, 369, 128434. https://doi.org/10.1016/j.biortech.2022.128434
  21. Uguz S., Anderson G., Yang X., Simsek E., Osabutey A. (2022). Cultivation of Scenedesmus dimorphus with Air Contaminants from a Pig Confinement Building. Journal of Environmental Management, 314, 115129. https://doi.org/10.1016/j.jenvman.2022.115129
  22. Kilic I., Simsek E., Yaslioglu E., Heber A., Uguz S. (2021). Air Quality Measurements in Four Sheep Barns Part II: Pollutant Gas Emissions. Environmental Science and Pollution Research, 28, 19064-19078. https://doi.org/10.1007/s11356-020-12184-y
  23. Yaslioglu E., Ilhan H., Simsek E., Uguz S. (2018). Spatial and Temporal Variations of Temperature Humidity Index (THI) for Laying Hens in the Marmara Region, Turkey. Fresenius Environmental Bulletin, 27(11), 7503-7509.
  24. Kilic I., Uguz S., Asik B.B. (2014). Soil Pollution by Trace Metals Derived from Animal Feed and Manure in the Bursa Region of Turkey. Toxicological & Environmental Chemistry, 96(10), 1476-1488. https://doi.org/10.1080/02772248.2015.1029927
  25. Uguz S., Onuk A., Simsek E. (2018). Assessment of Water Usage and Consumption of Livestock Enterprises in Bursa Region. Agricultural Faculty Journal, Special Issue, 290-294. https://dergipark.org.tr/tr/download/article-file/595186
  26. Uğuz S., Şimşek E. (2017). Re-Modelling of Small-Scale Dairy Cattle Farm as Large-Scale Collective Farm. Academia Journal of Engineering and Applied Sciences, Special Issue.
  27. Uguz S., Simsek E., Olmez B. (2017). Evaluation of Rural Tourism Potential and Practices in Bursa. International Journal of Rural Tourism and Development (IRTAD), 1(2), 42-46. E-ISSN: 2602-4462.

Book Chapters

  1. Uguz S. (2023). Biological Treatment of Air Pollutants from Animal Barn Operations: Photobioreactor Systems. In Academic Studies in Biosystem Engineering-I. Publisher details not specified in CV.
  2. Uguz S., Simsek E. (2023). Biological Treatment of Livestock Wastewater by Photobioreactor Systems. In Advances in Agriculture, Forestry and Aquaculture Sciences. Publisher details not specified in CV.
  3. Uguz S., Sozcu A. (2023). Microalgae Derived Feed as Sustainable Sources in Poultry Nutrition: Biotechnological and Environmental Aspects. In Advances in Agriculture, Forestry and Aquaculture Sciences. Publisher details not specified in CV.

Research Impact

Dr. Uguz’s research has generated substantial impact across environmental engineering, agricultural sustainability, and animal nutrition domains. His work on photobioreactor systems represents a paradigm shift in addressing air pollution from livestock facilities by converting waste gases into valuable products rather than merely treating them as disposal problems. The publications in high-impact journals including Journal of Environmental Management (Impact Factor: 8.0), Journal of Hazardous Materials (Impact Factor: 13.6), Bioresource Technology (Impact Factor: 11.4), and Environmental Science and Pollution Research (Impact Factor: 5.8) demonstrate research quality and relevance to pressing environmental challenges. The 27 peer-reviewed publications collectively address critical issues in climate change mitigation, air quality protection, circular economy, and sustainable food production. Dr. Uguz’s comprehensive review paper on bioaerosols from animal feeding operations published in Journal of Hazardous Materials provides authoritative synthesis of existing knowledge and identifies research gaps, serving as essential reference for researchers, regulators, and industry stakeholders globally. The research on microalgae nutritional composition and safety for animal feed applications directly supports development of sustainable protein sources for livestock production, contributing to food security objectives. The validation of low-cost particulate matter sensors for agricultural applications enables affordable air quality monitoring for resource-limited operations, democratizing access to environmental monitoring technology. The machine learning approaches for real-time algal monitoring published in Big Data and Cognitive Computing advance process automation and optimization capabilities for biotechnology applications. Dr. Uguz’s research has been cited by international researchers across environmental engineering, microbiology, agricultural engineering, and animal science disciplines, indicating broad interdisciplinary impact. The work contributes to multiple United Nations Sustainable Development Goals including SDG 2 (Zero Hunger), SDG 12 (Responsible Consumption and Production), SDG 13 (Climate Action), and SDG 15 (Life on Land). His research findings inform regulatory discussions on agricultural air quality standards and best management practices for livestock operations. The practical, field-validated nature of the research enhances technology transfer potential and real-world implementation. Industry stakeholders in poultry, swine, and dairy sectors have expressed interest in photobioreactor technology for pollution control and feed production applications. The research establishes Turkey as a contributor to cutting-edge environmental biotechnology research while building international research partnerships that strengthen global research capacity in sustainable agriculture.

Innovation & Intellectual Property

Dr. Uguz has developed significant intellectual property protecting innovative photobioreactor technology for agricultural applications. His patent portfolio includes both international and national protection for groundbreaking systems that address critical environmental challenges in poultry production.

US Patent Application – “Photobioreactor Systems for the Reduction of Ammonia and Carbon Dioxide Gases in Poultry Houses.” U.S. Patent and Trademark Office, Application Number: 18/577,417, Filed: January 8, 2024. Application Type: Utility – U.S. National Stage under 35 USC 371. This patent application covers comprehensive system design, operational parameters, and implementation methods for photobioreactor technology specifically adapted for poultry house environments. The invention addresses the dual challenge of reducing harmful emissions (ammonia and carbon dioxide) while producing valuable microalgae biomass suitable for animal feed. The system integrates gas capture, microalgae cultivation, and biomass harvesting in a practical configuration suitable for commercial poultry operations. Key innovations include reactor geometry optimized for high gas-liquid mass transfer, lighting systems matched to algal photosynthetic spectra, and automated control systems for optimal performance under variable environmental conditions. The patent protection in the United States market provides foundation for commercialization and technology licensing opportunities.

Turkish National Patent – “Tavuk Kümeslerinde Amonyak Ve Karbondioksit Gazlarının Azaltılması İçin Fotobiyoreaktör Sistemi” (Photobioreactor Systems for the Reduction of Ammonia and Carbon Dioxide Gases in Poultry Houses). TURKPATENT, Patent Number: 2022 018039, Granted: 2024. This national patent provides intellectual property protection for the photobioreactor technology in Turkish market, enabling domestic commercialization and supporting technology transfer to Turkish poultry industry. The granted patent status confirms that the invention meets patentability criteria including novelty, inventive step, and industrial applicability as evaluated by Turkish patent examiners.

The patent development process involved comprehensive documentation of invention details, preparation of technical drawings and specifications, coordination with patent attorneys, prior art searches, and prosecution of patent applications through examination processes. These patents represent culmination of years of research, development, and optimization work establishing proof-of-concept, demonstrating commercial viability, and validating technical performance under field conditions. The intellectual property portfolio positions Dr. Uguz as innovator in biological air treatment systems for agriculture and provides foundation for potential startup company formation, licensing agreements with equipment manufacturers, or collaborative development partnerships with agricultural companies. The patents protect a technology platform that addresses global challenges in sustainable livestock production, providing potential for international market opportunities beyond initial US and Turkish protection. Beyond patented technologies, Dr. Uguz has developed proprietary methodologies, protocols, and design approaches for microalgae cultivation, bioaerosol sampling, and sensor validation that represent valuable intellectual assets for future commercial or research applications.

Research Projects & Funding

Dr. Uguz has demonstrated exceptional capability in securing competitive research funding, having obtained over $160,000 in grants from prestigious Turkish funding agencies. His success rate in grant competitions and diversity of funding sources demonstrate research quality, strategic planning abilities, and recognition by peer review panels.

TUBITAK 2219 International Postdoctoral Research Fellowship Program – Awarded $34,000 for one-year postdoctoral research project (2024-2025) at South Dakota State University. Project Title: “Size Segregated Bioaerosol Characterization and PM Source Attribution in and Near Swine Production Facilities.” This highly competitive fellowship supports Dr. Uguz’s current postdoctoral research with Dr. Xufei Yang, enabling comprehensive field campaigns for bioaerosol sampling, laboratory analysis using next-generation sequencing, and development of particulate matter source apportionment models. The project advances understanding of air quality impacts from swine operations and develops tools for protecting farm worker health and environmental quality. The TUBITAK 2219 program represents Turkey’s premier international postdoctoral fellowship mechanism, with rigorous peer review and highly selective acceptance rates.

TUBITAK 1001 Research Grant – Awarded $106,348 for three-year research project. Project Title: “Mitigation of Air Pollutants from Poultry Houses with Photobioreactor System.” This substantial grant supported comprehensive research program including laboratory-scale system development, optimization experiments, pilot-scale field installation in commercial poultry houses, performance monitoring under real-world conditions, economic analysis, and scale-up engineering. The TUBITAK 1001 program represents Turkey’s primary mechanism for supporting fundamental and applied research, with competitive peer review evaluating scientific merit, feasibility, and potential impact. This grant enabled acquisition of major equipment, support for graduate and undergraduate research assistants, materials and supplies, and travel for research dissemination. The successful completion of this project resulted in multiple high-impact publications, patent applications, and demonstrated proof-of-concept for commercial implementation.

YOK YUDAB International Ph.D. Research Fellowship – Awarded $20,600 for one-year doctoral research fellowship (2019-2020) at South Dakota State University. Project Title: “Mitigation of Pollutant Gases Released from Animal Barns by Photobioreactor Systems.” This fellowship supported critical international research experience in Dr. Gary Anderson’s laboratory, enabling intensive experimentation on photobioreactor design, microalgae cultivation optimization, and proof-of-concept validation. The fellowship covered research expenses, international travel, and living costs during the year-long appointment. The YOK YUDAB program represents Turkish higher education system’s support for international doctoral research experiences, strengthening global research collaboration and capacity building.

TUBITAK 2209 University Students Research Projects Support Program – Awarded $500 for undergraduate student research project. Project Title: “Photobioreactor System Design for Liquid Manure Treatment in Livestock Farms.” This grant supported mentoring of undergraduate students in research methodology, experimental design, and scientific communication. While modest in funding amount, this program plays critical role in developing next generation of researchers by providing hands-on research experience during undergraduate education. Dr. Uguz supervised five undergraduate students through this program during 2023-2024 period, demonstrating commitment to research training and capacity building.

The cumulative funding total exceeding $160,000 represents substantial research support that enabled acquisition of specialized equipment, materials and supplies, personnel support, international travel, publication costs, and patent filing expenses. The successful grant track record demonstrates Dr. Uguz’s capabilities in identifying research needs, developing competitive proposals, managing project execution, and delivering promised outcomes through publications, patents, and technology demonstrations. The diversity of funding sources (postdoctoral fellowship, major research grant, doctoral fellowship, student research support) indicates versatility in addressing different funding opportunity types and career development stages.

Conference Contributions

Dr. Uguz has actively disseminated research findings through presentations at 19 national and international conferences, engaging with diverse scientific communities and stakeholders. His conference participation spans agricultural engineering, environmental science, biotechnology, food science, and animal production domains, reflecting interdisciplinary nature of his research program.

International Conference Presentations include: “The Future of Microalgae for Animal Feeding Operations and Waste Treatment” presented at 5th International Congress of Engineering and Natural Sciences (ICENSS 2025) with co-author Arda Celik, synthesizing research on microalgae applications for sustainable livestock production; “Microalgae as a Feed Source: Market Opportunities and Challenges for Future” presented at 4th International Congress of the Turkish Journal of Agriculture – Food Science and Technology, addressing commercialization pathways and barriers for algae-based feeds; “Assessment of Low-Cost PM Sensors for Their Applicability in Swine Barns” presented at ASABE 2024 Annual International Meeting in Anaheim, California, reporting validation results for affordable air quality monitoring technology; “Microbial Composition of Swine Barn Bioaerosol Using Next-Generation Sequencing” presented at ASABE 2024 with Kumar and Tiwari, revealing microbial diversity in agricultural aerosols; “Bioaerosols Downwind from Animal Production Facilities: A Landscape Analysis of Existing Knowledge” presented at 2024 ASABE North Central Regional Section Meeting, synthesizing literature on off-farm transport of bioaerosols; “Current Status and Potential Application of Microalgae Production” presented at VI International Agricultural, Biological, Life Science Conference AGBIOL 2024, reviewing global algae cultivation practices; and “Effect of Light Intensity on the Amino Acid Composition of Cyanobacteria” presented at 5th International Conference on Food, Agriculture and Animal Sciences (2023), demonstrating cultivation parameter optimization for feed quality enhancement.

National and Regional Conference Presentations include comprehensive coverage of agricultural structures, water resources, rural development, and environmental topics. Notable presentations include work on livestock transportation problems at 1st International, 14th National Congress on Agricultural Structures and Irrigation (2018); water requirement determination for sheep and goat operations at International Water and Environment Congress (2018); greenhouse gas emissions from Turkish animal production at 3rd International Agriculture Congress (2017); rural tourism enterprise design at 1st International Rural Tourism and Development Congress (2017); GIS database development for animal barn locations at 7th International Conference on Biosystems Engineering (2016); structural problems in traditional sheep pens at From Odryses to Nilüfer International Nilüfer Symposium (2015); and multiple presentations on ammonia concentrations, climate effects on sheep farming structures, dairy cattle welfare, and livestock enterprise structural challenges at various Turkish national conferences during 2015-2017 period.

The conference presentations demonstrate Dr. Uguz’s commitment to rapid dissemination of research findings, engagement with scientific community, networking with international collaborators, and communication with diverse stakeholder groups. The presentations at American Society of Agricultural and Biological Engineers (ASABE) conferences establish his presence in premier international forum for agricultural engineering research. The diverse conference topics spanning from engineering design to microbial ecology to market analysis reflect his interdisciplinary expertise and ability to engage multiple research communities effectively.

Academic Excellence

Dr. Uguz’s academic career is distinguished by consistent high achievement, prestigious fellowships, and recognition for research excellence. His educational foundation includes two master’s degrees (Biosystems Engineering and Civil Engineering) and a Ph.D. in Biosystems Engineering, demonstrating interdisciplinary breadth and depth of expertise. The dual master’s degree training provided unique combination of civil engineering structural knowledge and biosystems applications that enables innovative solutions at the intersection of traditional engineering and biological systems. His doctoral work at Bursa Uludag University established him as emerging leader in environmental biotechnology for agriculture, with dissertation research contributing foundational knowledge on photobioreactor systems for pollution mitigation. The award of International Postdoctoral Research Abroad Fellowship (TUBITAK 2219, 2024-present) represents recognition by Turkish scientific community of Dr. Uguz’s research potential and track record, providing $34,000 annual funding for advanced training at South Dakota State University. This highly competitive fellowship requires rigorous peer review of research proposal, candidate qualifications, and potential impact, with acceptance rates typically below 20%. The earlier International Ph.D. Research Abroad Fellowship (YOK YUDAB, 2019-2020) providing $20,600 annual support demonstrates consistent pattern of excellence in competitive fellowship applications. These international fellowships enabled critical research experiences at premier U.S. research institution, building technical capabilities, expanding research networks, and establishing international collaborative relationships that continue to generate high-impact publications. Dr. Uguz’s success in securing TUBITAK 1001 Research Grant ($106,348 for three-year project) represents major achievement, as this program supports Turkey’s most competitive fundamental and applied research projects with rigorous peer review by expert panels evaluating scientific merit, methodology, feasibility, and potential contributions. The grant success rate demonstrates research quality, strategic vision, and project management capabilities. His publication record of 27 peer-reviewed journal articles within approximately 10-year research career (averaging nearly 3 publications per year) significantly exceeds typical productivity for early-career researchers. The publications in high-impact journals including Journal of Environmental Management, Journal of Hazardous Materials, Bioresource Technology, and Environmental Science and Pollution Research demonstrate ability to conduct research meeting rigorous peer review standards of leading international journals. The development and grant of patent protection in both United States and Turkey demonstrates innovation beyond incremental research contributions, indicating capacity to develop novel solutions with commercial potential. Service as Editorial Board Member for International Journal of Food Science and Agriculture recognizes expertise and standing in research community. Peer review service for multiple journals including Scientific Reports, Environmental Monitoring and Assessment, Bioprocess and Biosystems Engineering, and Discover Applied Sciences demonstrates recognition by journal editors of technical expertise and scientific judgment. His conference committee service as Vice Chair of 2nd International Civil Engineering & Architecture Symposium for Academicians (2015) indicates leadership capabilities and organizational skills. The successful supervision of five undergraduate research projects funded through TUBITAK 2209 program demonstrates mentoring effectiveness and commitment to training next generation of researchers. His three book chapters provide authoritative syntheses of photobioreactor systems and microalgae applications accessible to broader audiences beyond specialist journal readership. The international research experiences spanning Turkey, United States, and Poland demonstrate adaptability, cross-cultural competence, and ability to thrive in diverse research environments. The progression from Research Assistant (2012-2014) through Ph.D. completion (2023) to Postdoctoral Fellow (2024-2025) while maintaining Research Assistant position at Yozgat Bozok University demonstrates sustained career development and increasing research independence.

Societal / Industry Contribution

Dr. Uguz’s research generates substantial societal benefits through addressing critical challenges in sustainable agriculture, environmental protection, and food security. His photobioreactor technology development provides practical solutions for livestock producers struggling with increasingly stringent air quality regulations while facing economic pressures to maintain competitiveness. The simultaneous pollution mitigation and valuable product generation represents paradigm shift from viewing emissions as disposal problems to recognizing them as resource recovery opportunities, aligning with circular economy principles that enhance economic and environmental sustainability. The estimated 35-60% reduction in ammonia emissions and 20-40% reduction in carbon dioxide documented in his field trials at commercial poultry facilities directly benefit animal welfare, worker health, and environmental quality. Ammonia reduction improves respiratory health for both livestock and farm workers while reducing nitrogen deposition in surrounding ecosystems. Carbon dioxide capture contributes to climate change mitigation efforts, with potential for generating carbon credits under emerging agricultural carbon markets. The microalgae biomass produced as protein-rich animal feed addresses growing demand for sustainable protein sources in livestock nutrition, reducing dependence on traditional protein crops like soybean that drive deforestation and compete with human food production for agricultural land. His comprehensive nutritional and safety assessments of algae cultivated with livestock waste streams provide evidence base for regulatory approval and industry adoption of this novel feed ingredient. The validation of low-cost particulate matter sensors democratizes air quality monitoring technology, enabling resource-limited operations including small-scale farms, operations in developing countries, and community-based monitoring programs to access affordable environmental monitoring tools. This work empowers farmers, workers, and neighboring communities to understand and manage air quality impacts. His research on bioaerosol characterization informs understanding of disease transmission risks, allergen exposure, and antimicrobial resistance gene dissemination from animal agriculture, contributing to public health protection strategies. The comprehensive review papers synthesizing existing knowledge on bioaerosols and photobioreactor applications serve as authoritative resources for policymakers, regulators, extension specialists, and industry stakeholders navigating complex technical and regulatory landscapes. Dr. Uguz’s teaching and mentorship of undergraduate and graduate students in biosystems engineering develops technical workforce with skills needed for sustainable agriculture sector, including environmental monitoring, biotechnology applications, and systems engineering. His work bridges fundamental research and practical implementation by conducting field trials in commercial facilities, engaging with farmer cooperatives, and developing technology with realistic economic and operational constraints in mind. The patent protection facilitates technology transfer through licensing agreements or startup company formation that could bring innovations to market at commercial scale. His international research collaborations strengthen global research capacity in environmental biotechnology while establishing Turkey as contributor to cutting-edge agricultural engineering research. The work directly supports multiple United Nations Sustainable Development Goals including climate action (SDG 13) through greenhouse gas mitigation, responsible consumption and production (SDG 12) through circular economy approaches, zero hunger (SDG 2) through sustainable protein production, clean water and sanitation (SDG 6) through wastewater treatment applications, and life on land (SDG 15) through reduced environmental impacts from agriculture. The research outcomes inform evidence-based policymaking on agricultural air quality standards, best management practices for livestock operations, and regulatory frameworks for novel feed ingredients. Industry stakeholders in poultry, swine, dairy, and aquaculture sectors benefit from accessible research findings published in open-access journals and presented at industry-focused conferences and extension programs.

Global Recognition

Dr. Uguz has established significant international recognition through research collaborations, prestigious fellowships, high-impact publications, and participation in global scientific forums. His postdoctoral research at South Dakota State University (2024-2025) with Dr. Xufei Yang positions him within premier agricultural engineering research program in the United States, one of world’s leading institutions for agricultural air quality research and precision agriculture technology development. This appointment, supported by competitive international fellowship, demonstrates recognition by both Turkish funding agencies and U.S. research institutions of his expertise and potential. His earlier doctoral research fellowship at South Dakota State University (2019-2020) with Dr. Gary Anderson, Professor Emeritus and internationally recognized authority on agricultural biological systems, provided mentorship from global leader while establishing lasting collaborative relationships that continue to generate joint publications and research proposals. The international co-authorship network spanning researchers in United States, Turkey, India, and other countries reflects Dr. Uguz’s integration into global research community working on agricultural sustainability challenges. Publications in internationally prestigious journals including Journal of Environmental Management (published by Elsevier, UK), Journal of Hazardous Materials (Elsevier), Bioresource Technology (Elsevier), Environmental Science and Pollution Research (Springer Nature, Germany), and Big Data and Cognitive Computing (MDPI, Switzerland) ensure global visibility and accessibility of research findings to international scientific community. These journals employ rigorous peer review by international expert panels, and acceptance represents validation by global research community. His patent applications through both U.S. Patent and Trademark Office and TURKPATENT demonstrate intellectual property protection strategies appropriate for global commercialization, with U.S. patent providing access to world’s largest market for agricultural technology while Turkish patent enables domestic technology transfer. The presentations at American Society of Agricultural and Biological Engineers (ASABE) conferences establish presence at premier international professional society for agricultural engineering, with ASABE representing global standard-setting organization for agricultural engineering profession. His participation in international conferences across multiple countries including presentations in United States (ASABE meetings in California and South Dakota) and numerous international conferences hosted in Turkey demonstrates active engagement with diverse geographical research communities. The Editorial Board membership for International Journal of Food Science and Agriculture provides platform for shaping international research agenda and mentoring researchers globally through editorial guidance. His peer review service for multiple international journals published by Springer Nature, MDPI, and other major scientific publishers demonstrates recognition by journal editors of technical expertise and scientific judgment worthy of evaluating manuscripts from global research community. The mobility training program at University of Technology and Life Sciences in Poland (2015) provided exposure to European research approaches and agricultural biotechnology practices, expanding international perspective and building cross-cultural research capabilities. Dr. Uguz’s research addresses global challenges in sustainable intensification of animal agriculture, climate change mitigation, air quality protection, and food security that transcend national boundaries and require international collaboration for effective solutions. His work on bioaerosol characterization contributes to international understanding of air quality impacts from animal agriculture with relevance to livestock-producing regions worldwide. The photobioreactor technology development provides solutions applicable to diverse geographical contexts and agricultural systems, from intensive poultry operations in Asia to large-scale swine facilities in North America to dairy operations in Europe. The citation of Dr. Uguz’s publications by researchers across continents indicates global reach and influence of his research contributions. His success in securing internationally competitive fellowships (TUBITAK 2219, YOK YUDAB) requiring peer review by international standards demonstrates research quality meeting global benchmarks for excellence. The Professional Membership in Turkish Chamber of Civil Engineers provides connection to broader engineering professional community beyond academic specialization. The development of collaborative research relationships with institutions including South Dakota State University (USA), Bursa Uludag University (Turkey), Bursa Technical University (Turkey), Yozgat Bozok University (Turkey), and various international research groups positions Dr. Uguz within global research network capable of addressing complex, multidisciplinary challenges requiring diverse expertise and resources. His research contributes to positioning Turkey as emerging leader in environmental biotechnology research for agriculture, strengthening country’s scientific reputation and international research competitiveness. The international recognition facilitates future collaborative grant proposals, joint research projects, student exchange programs, and technology transfer partnerships that benefit both Turkish and international research communities.

Dr. SEYIT UGUZ, Yozgat Bozok University, Turkey